Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798827.1_cds_XP_016462100.1_5501
CDS Infomation

[gene=LOC107785335] [db_xref=GeneID:107785335] [protein=extensin-like] [protein_id=XP_016462100.1] [location=complement(join(2179..3279,4249..4566))] [gbkey=CDS]
Sequence

ATGGGGTTCTTTTGTATTTACGTTTCTACTTCTGTGCAGAATTATGGTTCTCTTGACTCG
ACTGAAGCTGCCAAAGCTATTGTGGAGAAAGATTTGAGCAGTGTTTATTCATCTTTGTTA
TCGGAAATTGATCACACAGTTAAGAAGTATGCCGATAATCTTCTGCATGCAATGGAGGGA
GTAAGTGCTCGGCTATCACAATTAGAAACTAGAAGTCGCCAGATTGATAACTCTGTTGAT
GAACTTAAGTTGTCTGTTGGTAACAACCACGGAGTCACTGATGGAAAATTGAGACAGTTG
GAAAATATACTCAGACAGGTGCAAGATGGTGTTCAGGTGATAAGAGATAAACAGGAAATA
ATGGATGCTCAGCTGCAGCTCATGAAATCGCAAGCTCCAAAGGTTGAGCAGGAAGCAGAA
ACCCACAATACTACACATAAGGATTCATCCCAACCTACAGCATCTGCTCCTCTTCAATCC
CACCAGCAATTTCCTCCTGTTGCTCTTACACAACCACCTTCTACCGTACCTCCTCCAAAT
GCTCCTCCGCCCCCTCCTCAACAGAATCCGCCATACCAAGTTCAACTTCAGAACCAGTTT
CCTCAGAATCCAATTCCCTCCCATCCTCAGTCAGAAGCTTATTATCCCCCGGCTGGTCAA
GCACCGGAAAACTTAAGTCAGCAGTACCAACTGCCTGCACCACAGCAGCATCAGACTCCA
CCACCACCTCCACATCAGCAATATCAGTCTACCCCTCCGCCAATGTACTCTCAGCCACCT
CCACCTGCTCAACCACAACCCCCTCATTCCTCTGTTAATCCCTCACAACCTCAACCTCTA
GTAGGCCATCATCGTGAAGAGACACCTTTTGTACCATCCCAGAATTATCCACCACCAAGC
ATCCGCCAACCTCCTCATCCATCAAGTGGAGCCCCTCCATCCCAGCAGTTATATGCAGCT
CCCCCTAATATGTTTGAGCCCCCACCTAGCAGACCTGGTCCCGGATATTCTGGTGTATAT
CCACCATCCTCTGTGCATGGTGAACCTTATCCTTATAGCAGTTCCCCACGTCAGTATGGC
AGTGGCTCCTCAATGAAACCACCTCAAGTTAACTTACCTGCAATGGGCCAGAGTGGTGGA
AGTGGCTATCAGCAGCTCCCCACTGCAAGGATATTACCTCAAGCACTACCTACGGCTTCT
GCTGTTAGTAGTGGGTCTAGTTCTCCCAGTACTGGTAATAGGGTTCCTATTGATGATGTT
GTTGACAAAGTGACGAACATGGGATTTTCAAGAGACCAAGTAAGGGCAACGGTGCGGAGG
TTGACTGAGAGTGGACAGGCTGTCGATTTGAATACAGTGTTGGACAAGTTGATGAATGAT
GGAGACGTTCAGCCACCACGAGGCTGGTTTGGTCGGTAG

Peptide Sequence

PEP ID

XP_016462100.1
PEP Infomation

PREDICTED: extensin-like [Nicotiana tabacum]
Sequence

MGFFCIYVSTSVQNYGSLDSTEAAKAIVEKDLSSVYSSLLSEIDHTVKKYADNLLHAMEG
VSARLSQLETRSRQIDNSVDELKLSVGNNHGVTDGKLRQLENILRQVQDGVQVIRDKQEI
MDAQLQLMKSQAPKVEQEAETHNTTHKDSSQPTASAPLQSHQQFPPVALTQPPSTVPPPN
APPPPPQQNPPYQVQLQNQFPQNPIPSHPQSEAYYPPAGQAPENLSQQYQLPAPQQHQTP
PPPPHQQYQSTPPPMYSQPPPPAQPQPPHSSVNPSQPQPLVGHHREETPFVPSQNYPPPS
IRQPPHPSSGAPPSQQLYAAPPNMFEPPPSRPGPGYSGVYPPSSVHGEPYPYSSSPRQYG
SGSSMKPPQVNLPAMGQSGGSGYQQLPTARILPQALPTASAVSSGSSSPSTGNRVPIDDV
VDKVTNMGFSRDQVRATVRRLTESGQAVDLNTVLDKLMNDGDVQPPRGWFGR

Transcript Sequence

Gene sequence data has not been registered.